Hide Linked model categories?

Probably yes.
the Revit API to handle linked elements visibility is new and not complete, it would work with 2024+

Maybe a better / manual workflow would be to play with view templates:

  • record view templates applied to every view,
  • edit them to ‘not take care of the linked elements category visibility’
  • create a template that does turn off categories in links and does just that, and apply it to every view
  • re apply previous templates

Bold stuff could be done in a script to get there faster if you have to do it on multiple models, if not, manually should be faster

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